Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006692.1 Corchorus capsularis cultivar CVL-1 contig06713, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18761

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79--110
2
15.5
2
93
6
55
46
3
0
50
1.17
196--425
22
10.8
22
67
11
75
35
15
8
40
1.78
9808--9848
13
3.2
13
92
0
64
26
43
17
12
1.84
15205--15248
22
2.2
19
88
12
61
54
0
4
40
1.21
16416--16471
22
2.5
22
76
2
58
42
14
8
33
1.77
16482--16560
23
3.5
23
87
3
106
39
17
3
39
1.68
16468--16560
23
4.1
22
84
2
96
37
18
5
38
1.74
16651--16774
64
1.9
66
81
6
155
41
12
7
38
1.71
16797--16896
22
4.5
22
79
9
89
35
13
10
42
1.77
17233--17396
22
7.5
22
70
15
101
32
15
9
41
1.80
17445--17562
22
5.4
22
67
15
73
35
18
8
37
1.81
17598--17745
67
2.2
65
77
7
154
35
18
10
34
1.86
17567--17798
22
10.5
22
70
6
101
36
17
10
35
1.84

Tables:   1

The End!