Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006698.1 Corchorus capsularis cultivar CVL-1 contig06719, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33372

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2930--3037
33
3.3
33
85
3
137
12
23
41
23
1.87
4318--4392
33
2.3
33
85
0
105
20
44
22
13
1.86
8306--8411
53
2.0
53
100
0
212
26
13
20
39
1.89
11034--11078
13
3.5
13
90
3
74
22
13
8
55
1.65
11026--11078
25
2.1
25
93
6
90
22
11
7
58
1.57
11075--11107
6
5.5
6
100
0
66
30
0
15
54
1.41
15800--15843
20
2.1
22
91
8
74
25
9
4
61
1.45
16433--16457
10
2.5
10
100
0
50
48
20
8
24
1.76
26781--26817
11
3.5
11
85
14
60
81
0
0
18
0.70
26781--26814
9
3.7
9
92
4
50
82
0
0
17
0.67
30187--30277
10
8.1
12
66
22
54
24
41
24
9
1.85
30199--30277
33
2.4
33
91
0
122
24
43
24
8
1.82
30519--30551
6
5.5
6
100
0
66
54
15
0
30
1.41
30548--30584
12
3.0
12
84
7
56
54
8
13
24
1.66
30548--30594
13
3.7
13
85
2
60
57
10
12
19
1.64
30548--30600
25
2.1
25
86
6
72
58
11
11
18
1.62

Tables:   1

The End!