Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006703.1 Corchorus capsularis cultivar CVL-1 contig06724, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19457

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
705--781
39
2.0
39
94
0
136
3
16
29
49
1.64
1280--1362
42
2.0
43
97
2
159
38
13
27
20
1.90
1544--1608
30
2.1
32
94
5
116
33
6
26
33
1.81
1791--1848
26
2.2
27
90
6
93
10
13
24
51
1.72
8843--8989
44
3.4
43
78
9
145
37
14
10
36
1.82
8843--9062
44
5.1
43
73
10
144
37
15
11
35
1.84
8843--9062
87
2.6
85
77
6
212
37
15
11
35
1.84
8843--9151
22
13.9
23
69
16
125
35
16
11
36
1.85
9091--9165
22
3.5
20
80
10
87
33
18
9
38
1.83
9501--9552
22
2.4
22
87
6
70
38
11
9
40
1.74

Tables:   1

The End!