Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006704.1 Corchorus capsularis cultivar CVL-1 contig06725, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27696

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38--77
2
21.5
2
85
14
59
52
0
0
47
1.00
1366--1394
2
14.5
2
100
0
58
51
0
0
48
1.00
2553--2647
42
2.3
42
85
7
147
31
40
16
11
1.85
2572--2642
24
3.2
24
64
22
64
32
40
12
14
1.83
2683--2767
24
3.5
24
83
0
89
25
44
16
12
1.83
9485--9515
15
2.1
15
93
0
53
38
6
25
29
1.81
16197--16339
71
2.0
71
95
0
259
33
10
13
41
1.79
21590--21628
20
2.0
20
94
0
69
17
30
17
33
1.94
22539--22844
41
7.4
41
80
3
319
22
11
26
39
1.88
22548--22844
83
3.6
83
94
0
515
22
11
26
39
1.89
23595--23721
35
3.6
34
82
6
139
29
11
33
26
1.91
23583--23713
70
1.9
70
82
3
165
27
12
31
29
1.93
25594--25713
60
2.0
60
96
0
222
19
19
25
36
1.94
26705--26824
60
2.0
60
100
0
240
18
20
25
36
1.94

Tables:   1

The End!