Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006705.1 Corchorus capsularis cultivar CVL-1 contig06726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11380

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1107--1165
31
1.9
30
82
3
73
27
13
23
35
1.92
1641--1687
16
3.1
15
77
22
53
51
8
10
29
1.66
3683--3717
11
3.2
11
83
0
52
77
17
5
0
0.96
4259--4302
21
2.1
21
83
8
54
18
31
9
40
1.81
4475--4561
35
2.6
33
80
7
102
11
34
43
10
1.75
4643--4779
32
4.2
32
77
9
116
12
35
39
12
1.81
7009--7097
45
2.0
44
91
2
142
33
17
22
25
1.96
7151--7481
166
2.0
167
86
1
459
30
15
16
38
1.89
10758--11368
41
14.8
42
68
16
233
15
26
22
35
1.94
10714--11139
163
2.6
163
86
4
538
15
26
21
36
1.94
11082--11258
81
2.2
83
82
3
216
14
24
24
35
1.94
11290--11380
40
2.2
41
88
5
132
14
21
26
37
1.92

Tables:   1

The End!