Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006707.1 Corchorus capsularis cultivar CVL-1 contig06728, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28082

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1342--1394
21
2.5
20
84
3
61
9
32
32
26
1.88
7653--7677
13
1.9
13
100
0
50
76
8
0
16
1.02
10421--10626
102
2.0
102
100
0
412
37
18
18
25
1.94
14644--14677
11
3.2
10
84
15
50
29
2
17
50
1.61
16319--16397
35
2.4
32
79
8
86
34
12
6
46
1.67
19827--19877
23
2.3
21
80
6
57
9
47
25
17
1.78
21765--21798
11
3.1
11
91
0
59
29
0
17
52
1.45
22920--22998
27
2.9
27
88
1
104
16
17
24
41
1.89
23663--23696
16
2.1
16
88
0
50
58
11
20
8
1.59

Tables:   1

The End!