Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006708.1 Corchorus capsularis cultivar CVL-1 contig06729, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25090

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
276--317
20
2.1
21
86
8
61
28
7
7
57
1.52
8952--9032
40
2.0
40
100
0
162
24
23
22
29
1.99
22080--22106
7
3.9
7
100
0
54
29
11
29
29
1.91
22731--22794
30
2.1
30
82
5
76
45
9
7
37
1.66
24302--24381
12
6.5
12
92
5
133
25
22
16
36
1.94
24302--24381
25
3.2
25
96
1
144
25
22
16
36
1.94
24303--24381
37
2.1
37
93
4
133
25
22
16
35
1.95
24603--24701
33
2.8
34
75
16
94
26
9
15
49
1.74
24736--24780
16
2.8
16
86
3
54
71
6
0
22
1.09
24963--25004
21
2.0
21
90
0
66
40
16
11
30
1.85
25010--25046
2
19.0
2
94
5
67
51
0
0
48
1.00

Tables:   1

The End!