Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006710.1 Corchorus capsularis cultivar CVL-1 contig06731, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17168

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179--232
22
2.5
22
85
11
67
37
9
11
42
1.73
1140--1203
31
2.1
31
85
5
87
46
4
18
29
1.69
1232--1274
2
21.0
2
90
4
68
48
0
4
46
1.22
2144--2168
9
2.8
9
100
0
50
68
0
32
0
0.90
3375--3401
2
13.5
2
100
0
54
48
0
0
51
1.00
9572--9614
15
2.9
15
82
0
50
20
16
23
39
1.92
9749--9915
90
1.9
90
92
0
280
20
27
20
31
1.98
12109--12139
14
2.3
14
94
5
55
80
0
12
6
0.89
16356--16394
19
2.1
19
95
0
69
43
15
7
33
1.75

Tables:   1

The End!