Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006712.1 Corchorus capsularis cultivar CVL-1 contig06733, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19873

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6652--6712
29
2.1
29
100
0
122
27
14
19
37
1.91
9312--9352
17
2.5
17
84
7
59
53
12
14
19
1.72
10430--10892
74
6.3
73
82
5
465
28
14
14
42
1.85
10430--10892
147
3.1
147
85
4
605
28
14
14
42
1.85
10483--10886
221
1.8
221
85
4
564
28
15
14
42
1.85
14564--14638
16
4.7
16
86
6
116
5
13
37
44
1.66
14550--14623
32
2.3
32
85
0
94
4
14
43
37
1.65
14628--14682
23
2.4
23
84
0
65
5
23
41
29
1.76
15424--15465
17
2.5
17
88
7
59
0
21
50
28
1.49
17712--17951
130
1.8
130
83
3
322
36
14
15
34
1.87
19288--19350
29
2.1
30
82
8
76
25
17
9
47
1.77
19525--19599
29
2.5
30
82
6
100
44
14
22
18
1.86

Tables:   1

The End!