Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006713.1 Corchorus capsularis cultivar CVL-1 contig06734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15914

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
393--449
16
3.6
16
73
0
60
38
40
3
17
1.67
383--449
32
2.1
32
94
0
116
38
35
5
19
1.76
4371--4431
17
3.4
17
71
10
59
45
1
4
47
1.34
4343--4477
59
2.2
61
85
6
177
45
2
2
48
1.29
4435--4478
7
6.3
7
84
7
54
50
0
2
47
1.13
4371--4471
20
5.2
20
70
16
86
45
0
3
49
1.27
4438--4479
13
3.0
14
75
10
50
47
0
2
50
1.14
7563--7603
20
2.0
20
85
0
55
46
19
2
31
1.63
9985--10241
74
3.4
75
81
6
286
29
31
17
21
1.96
10096--10236
75
1.9
71
87
5
201
30
28
20
20
1.98
10262--10291
15
2.0
15
100
0
60
40
0
33
26
1.57
10600--10670
21
3.0
25
73
23
73
47
2
9
39
1.51
11516--11561
24
1.9
24
86
0
65
28
15
30
26
1.96

Tables:   1

The End!