Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006714.1 Corchorus capsularis cultivar CVL-1 contig06735, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32719

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
797--1162
110
3.3
109
73
7
337
42
19
15
23
1.89
6795--6887
46
2.0
46
97
0
177
46
11
13
27
1.79
13917--14079
81
2.0
82
89
3
249
28
5
23
42
1.76
15214--15249
16
2.2
16
100
0
72
27
5
8
58
1.50
24731--24781
24
2.2
24
82
3
59
21
7
11
58
1.58
30409--30632
111
2.0
111
93
0
385
26
21
23
27
1.99

Tables:   1

The End!