Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006716.1 Corchorus capsularis cultivar CVL-1 contig06737, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26649

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6273--6332
26
2.3
26
97
2
113
56
13
8
21
1.63
9542--9585
19
2.2
20
84
11
56
29
4
6
59
1.44
9974--10017
19
2.2
20
84
11
56
29
4
6
59
1.44
10115--10150
16
2.2
16
90
0
54
19
0
33
47
1.50
12401--12435
2
18.0
2
88
5
54
48
2
0
48
1.16
26198--26243
14
3.4
14
80
14
60
6
34
2
56
1.37

Tables:   1

The End!