Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006717.1 Corchorus capsularis cultivar CVL-1 contig06738, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31497

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
721--766
14
3.4
14
77
14
51
6
32
2
58
1.36
5402--5458
28
2.0
28
96
0
105
14
40
7
38
1.73
17674--17720
24
2.0
24
86
0
67
21
17
21
40
1.91
18077--18104
2
14.0
2
100
0
56
50
0
0
50
1.00
18978--19045
33
2.1
33
100
0
136
33
23
22
20
1.97
22410--22450
17
2.5
17
88
4
57
34
24
14
26
1.94
23422--23479
30
1.9
30
92
0
98
34
10
22
32
1.88
23422--23492
30
2.3
30
87
4
97
36
9
23
29
1.87
26812--26879
34
2.0
34
100
0
136
32
17
29
20
1.96

Tables:   1

The End!