Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006718.1 Corchorus capsularis cultivar CVL-1 contig06739, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22165

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7015--7072
27
2.2
26
78
3
62
27
12
24
36
1.91
7446--7659
29
7.2
29
75
8
205
31
12
31
24
1.92
7446--7698
61
4.2
58
70
13
181
32
12
31
24
1.92
7445--7674
90
2.6
90
94
0
406
32
12
31
23
1.92
13088--13659
203
2.9
203
94
2
984
35
19
17
27
1.94
14565--14633
33
2.1
33
91
0
111
43
7
11
37
1.69
14846--14889
23
1.9
23
85
0
61
50
4
6
38
1.50
14980--15230
78
3.0
84
82
11
307
50
0
12
36
1.44
15133--15166
8
4.2
8
92
0
50
55
0
17
26
1.42
16098--16529
161
2.6
165
80
7
515
30
14
14
40
1.86

Tables:   1

The End!