Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006723.1 Corchorus capsularis cultivar CVL-1 contig06744, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23316

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1336--1567
22
10.7
22
68
17
110
37
17
11
34
1.85
1336--1559
66
3.4
64
75
9
211
37
16
11
34
1.84
3722--3771
16
3.2
16
75
11
59
34
30
24
12
1.91
3886--3932
21
2.2
21
92
0
76
29
8
6
55
1.55
4392--4517
16
8.1
16
77
10
127
34
36
22
7
1.81
4414--4517
9
13.1
8
67
23
51
33
35
22
8
1.85
12056--12170
31
3.7
30
77
9
106
10
12
33
43
1.76
12052--12171
16
7.7
16
76
8
122
10
12
34
43
1.76
12161--12203
6
7.5
6
79
10
54
2
20
44
32
1.65
12161--12203
17
2.5
17
81
7
52
2
20
44
32
1.65
12941--12980
16
2.5
16
88
8
55
10
10
40
40
1.72
18930--18972
21
2.0
21
95
0
77
48
18
6
25
1.73
20390--20422
6
5.7
6
96
3
59
54
12
0
33
1.37
20369--20434
18
3.9
18
73
16
52
59
10
6
24
1.53
23226--23280
2
27.5
2
100
0
110
50
0
49
0
1.00

Tables:   1

The End!