Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006726.1 Corchorus capsularis cultivar CVL-1 contig06747, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26813

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
192--230
6
6.7
6
91
5
62
30
0
2
66
1.05
1495--1581
30
2.9
31
76
10
81
42
1
4
51
1.29
9905--10238
167
2.0
167
99
0
659
29
13
23
33
1.93
14551--14589
14
2.8
14
96
0
69
23
12
33
30
1.92
15156--15197
2
21.0
2
100
0
84
50
0
50
0
1.00
19678--19754
2
38.0
2
82
2
64
37
0
10
51
1.36
22221--22333
32
3.5
32
80
2
127
30
16
23
29
1.96

Tables:   1

The End!