Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006727.1 Corchorus capsularis cultivar CVL-1 contig06748, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12644

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34--324
50
5.8
50
84
6
390
15
29
18
37
1.91
36--316
153
1.8
153
92
1
474
15
29
18
36
1.92
2222--2413
94
2.0
95
90
1
305
32
8
17
41
1.80
3089--3126
14
2.7
14
88
8
51
42
7
15
34
1.76
10069--10132
27
2.3
28
89
5
94
70
1
20
7
1.21
12115--12436
51
6.4
51
75
11
292
40
4
15
39
1.66
12115--12436
103
3.2
99
78
10
302
40
4
15
39
1.66
12115--12396
147
1.9
147
84
5
372
39
3
15
40
1.66
12333--12374
20
2.1
20
90
0
66
47
2
11
38
1.53

Tables:   1

The End!