Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006739.1 Corchorus capsularis cultivar CVL-1 contig06760, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18446

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3781--3856
30
2.5
30
80
6
91
31
28
14
25
1.95
3831--3890
18
3.3
18
85
0
84
31
26
13
28
1.94
6205--6264
15
4.0
15
91
0
93
23
18
36
21
1.95
6198--6262
30
2.1
31
94
2
114
21
18
35
24
1.96
8931--8974
19
2.3
19
81
18
56
47
4
36
11
1.60
8942--8996
21
2.8
20
88
5
76
45
5
38
10
1.63
11646--11693
20
2.5
19
80
6
53
52
0
16
31
1.45
12349--12403
20
2.8
19
78
5
56
23
1
18
56
1.51
18252--18288
2
18.5
2
100
0
74
48
0
0
51
1.00

Tables:   1

The End!