Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006749.1 Corchorus capsularis cultivar CVL-1 contig06770, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15226

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2115--2187
27
2.7
27
80
2
85
17
10
23
47
1.79
7230--7285
28
2.0
28
82
6
69
16
17
7
58
1.59
10800--10875
3
25.3
3
100
0
152
67
0
0
32
0.91
11527--11572
23
2.1
22
84
11
60
67
2
28
2
1.14
11615--11657
12
3.5
12
79
14
52
34
4
18
41
1.71
11613--11679
26
2.6
25
88
4
89
38
5
17
37
1.75
12272--12341
17
4.4
17
65
23
53
60
8
24
7
1.51
12245--12341
46
2.1
47
92
1
160
58
9
24
7
1.54
12887--12935
6
7.5
6
78
17
53
77
2
18
2
0.96
12887--12937
14
3.8
13
84
10
59
76
1
19
1
0.98
12879--12935
20
2.8
21
79
12
66
77
1
17
3
1.00
13833--14187
69
5.1
69
79
7
389
24
27
20
27
1.99
13833--14187
138
2.6
138
91
1
570
24
27
20
27
1.99
14307--14443
48
2.9
48
88
0
202
23
24
16
35
1.94
14762--14834
27
2.7
27
80
2
85
17
10
23
47
1.79

Tables:   1

The End!