Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006750.1 Corchorus capsularis cultivar CVL-1 contig06771, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12907

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7880--7972
2
48.5
2
78
12
79
44
1
3
51
1.24
7880--7972
17
5.4
17
75
12
91
44
1
3
51
1.24
7880--7951
19
3.8
18
80
8
72
47
1
1
50
1.18
9566--9629
26
2.5
25
75
9
67
34
7
1
56
1.38
11232--11384
66
2.3
65
84
8
186
35
11
15
37
1.83
11279--11385
22
4.9
22
83
4
144
34
13
16
35
1.88
11234--11439
22
9.3
22
78
8
141
34
9
17
38
1.83
11232--11439
66
3.1
66
80
8
183
34
9
17
38
1.83
11475--11893
22
18.9
22
69
12
169
40
8
15
34
1.79
12105--12196
23
4.0
23
81
2
96
41
6
17
34
1.75
12105--12521
22
18.9
21
67
16
123
38
10
15
35
1.81

Tables:   1

The End!