Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006751.1 Corchorus capsularis cultivar CVL-1 contig06772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31611

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
223--255
16
2.1
16
94
0
57
27
18
36
18
1.94
1063--1106
21
2.2
20
91
4
70
40
4
38
15
1.68
1097--1160
30
2.1
30
82
5
76
28
10
25
35
1.89
1478--1510
16
2.1
16
94
0
57
27
18
36
18
1.94
19054--19116
30
2.1
30
93
0
108
14
23
22
39
1.91
19059--19117
15
3.9
15
86
0
82
11
23
22
42
1.86
29276--29325
24
2.1
24
100
0
100
38
8
12
42
1.71
30920--30963
14
3.3
14
90
6
65
27
0
9
63
1.24

Tables:   1

The End!