Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006752.1 Corchorus capsularis cultivar CVL-1 contig06773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12621

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6053--6087
3
12.3
3
88
11
56
34
0
0
65
0.93
6045--6087
23
1.9
22
90
4
68
34
0
0
65
0.93
6502--6669
85
2.0
85
96
0
309
51
7
12
27
1.67
6531--6767
85
2.8
83
82
6
232
51
12
9
27
1.70
7193--7259
33
2.0
33
100
0
134
53
5
17
22
1.65
7195--7249
17
3.3
17
74
5
67
54
5
18
21
1.63
9811--9852
2
21.0
2
80
9
50
47
7
0
45
1.30
10251--10369
57
2.1
57
100
0
238
39
10
17
32
1.83

Tables:   1

The End!