Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006753.1 Corchorus capsularis cultivar CVL-1 contig06774, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35272

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7973--8012
19
2.1
19
100
0
80
17
12
15
55
1.70
12737--12769
2
16.5
2
100
0
66
48
0
0
51
1.00
13741--13768
2
14.0
2
100
0
56
50
0
0
50
1.00
17748--17795
25
1.9
25
95
0
87
45
20
12
20
1.83
18090--18133
22
2.0
21
86
8
61
40
4
9
45
1.56
19900--20294
209
1.9
209
99
0
781
47
12
13
26
1.79
22717--22760
14
3.3
14
90
6
65
63
9
0
27
1.24
24132--24217
44
1.9
45
81
6
104
44
1
1
53
1.15
24355--24404
24
2.1
24
100
0
100
42
12
8
38
1.71
31355--31420
32
2.1
32
88
0
96
50
4
12
33
1.60
34577--34626
15
3.3
15
88
0
82
44
22
22
12
1.85
34569--34631
30
2.1
30
93
0
108
39
22
23
14
1.91

Tables:   1

The End!