Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006756.1 Corchorus capsularis cultivar CVL-1 contig06777, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8680

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72--107
19
1.9
18
88
5
54
41
0
22
36
1.54
5846--5879
17
2.0
17
94
0
59
23
5
14
55
1.61
6700--6806
33
3.2
32
86
5
126
8
28
40
22
1.83
6943--7010
27
2.5
27
85
4
93
33
23
13
29
1.93
7814--8321
49
10.3
49
75
5
346
33
15
29
22
1.94
7814--8316
99
5.1
97
76
7
392
32
15
29
22
1.95

Tables:   1

The End!