Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006761.1 Corchorus capsularis cultivar CVL-1 contig06782, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29974

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49--80
2
16.5
2
93
6
57
50
0
0
50
1.00
7507--7579
33
2.2
33
97
2
137
38
5
36
19
1.75
8635--8691
30
1.9
30
85
7
80
42
12
17
28
1.85
13966--14013
3
16.0
3
95
0
87
64
0
2
33
1.05
14762--14909
78
1.9
78
100
0
296
27
21
11
39
1.88
25112--26182
50
21.7
49
78
7
920
37
17
26
18
1.92
25112--26182
100
10.8
101
78
6
1032
37
17
26
18
1.92
25151--26182
296
3.5
296
83
6
1116
38
17
26
18
1.92

Tables:   1

The End!