Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006764.1 Corchorus capsularis cultivar CVL-1 contig06785, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22048

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6590--6650
31
2.0
31
87
6
90
47
1
0
50
1.10
6593--6657
29
2.2
31
83
5
80
53
3
0
43
1.16
9293--9330
2
19.0
2
100
0
76
50
0
0
50
1.00
11630--11657
12
2.3
12
100
0
56
17
0
25
57
1.41
14835--14903
32
2.2
32
83
0
84
26
24
18
30
1.98
14913--15382
227
2.1
227
85
4
635
20
21
25
31
1.98
15641--15692
13
4.0
13
94
0
95
0
40
0
59
0.97
15961--16028
24
2.7
25
72
4
66
33
4
25
36
1.76
17044--17088
13
3.3
13
82
11
54
44
0
17
37
1.49
17047--17078
15
2.1
15
94
0
55
50
0
15
34
1.45
18375--18409
17
2.1
17
88
0
52
20
14
20
45
1.85
20042--20109
24
2.8
24
74
12
68
20
32
22
25
1.98

Tables:   1

The End!