Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006773.1 Corchorus capsularis cultivar CVL-1 contig06794, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23128

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1152--1328
73
2.4
73
93
0
300
28
18
19
33
1.95
14870--14904
18
1.9
18
88
0
52
34
0
0
65
0.93
17485--17546
29
2.1
30
84
6
81
30
3
19
46
1.65
18223--18449
21
10.9
21
82
5
255
25
11
25
36
1.91
18223--18449
62
3.7
61
87
1
301
25
11
25
36
1.91
18223--18451
83
2.7
83
83
6
268
26
11
25
35
1.91
18560--18625
18
3.3
18
67
28
53
34
22
9
33
1.86

Tables:   1

The End!