Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006784.1 Corchorus capsularis cultivar CVL-1 contig06805, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42337

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1395--1458
30
2.1
29
100
0
110
31
23
9
35
1.87
3394--3519
57
2.2
57
97
1
236
34
26
16
22
1.95
3471--3774
67
4.6
67
88
5
465
32
22
20
25
1.97
3471--3774
133
2.3
134
90
4
472
32
22
20
25
1.97
12433--12473
17
2.3
18
87
4
57
17
4
19
58
1.56
27238--27270
6
5.7
6
89
3
50
12
3
0
84
0.72

Tables:   1

The End!