Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006785.1 Corchorus capsularis cultivar CVL-1 contig06806, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24086

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3546--3612
31
2.2
31
94
5
118
37
10
13
38
1.79
5965--6254
147
2.0
147
98
0
562
39
15
22
23
1.92
11717--11811
45
2.1
45
98
1
183
30
13
24
31
1.94
16462--16818
177
2.0
177
100
0
714
31
11
19
36
1.88
17841--17928
34
2.8
30
77
15
97
23
14
21
39
1.91
17848--17912
34
1.9
34
96
0
121
24
12
21
41
1.87
19584--19614
1
31.0
1
100
0
62
0
0
0
100
0.00
19843--19929
41
2.0
46
86
10
130
40
18
18
22
1.91

Tables:   1

The End!