Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006786.1 Corchorus capsularis cultivar CVL-1 contig06807, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15756

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
190--299
29
3.7
29
91
2
166
37
15
22
24
1.93
1362--1398
2
19.0
2
91
5
58
45
0
0
54
1.00
6694--6734
2
21.0
2
90
5
66
48
0
2
48
1.14
7180--7219
2
21.5
2
85
14
59
50
0
0
50
1.00
8139--8195
24
2.4
24
90
0
96
3
26
10
59
1.46
14600--14722
32
3.8
32
79
13
142
29
15
7
47
1.72
14726--14889
36
4.6
36
88
1
197
23
23
10
42
1.86
14898--15022
11
11.4
11
79
0
115
26
16
11
46
1.80
14885--15024
33
4.2
32
80
4
154
25
17
11
46
1.81
15003--15056
26
2.1
26
92
0
90
14
14
7
62
1.51
15026--15086
11
5.5
11
71
9
52
11
14
8
65
1.46
15016--15074
24
2.4
25
86
11
77
11
15
8
64
1.49
15100--15264
36
4.5
36
80
4
179
27
14
10
46
1.78

Tables:   1

The End!