Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006787.1 Corchorus capsularis cultivar CVL-1 contig06808, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9609

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3011--3041
6
5.2
6
92
0
53
45
35
0
19
1.51
3040--3153
38
3.0
38
94
1
194
21
36
20
21
1.95
7063--7094
10
3.2
10
90
0
55
56
12
21
9
1.64
7867--7936
24
2.9
25
77
8
74
2
24
10
62
1.40
9574--9602
2
14.5
2
100
0
58
51
0
48
0
1.00

Tables:   1

The End!