Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006788.1 Corchorus capsularis cultivar CVL-1 contig06809, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22816

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4563--4587
13
1.9
13
100
0
50
56
16
12
16
1.68
4508--5203
113
6.3
114
84
10
984
33
21
20
24
1.97
4576--5203
101
5.8
103
84
10
716
33
22
20
24
1.97
4508--5203
214
3.2
214
91
3
1081
33
21
20
24
1.97
7068--7141
34
2.2
33
83
7
87
27
24
24
24
2.00
7333--7787
226
2.0
226
96
0
831
42
10
13
32
1.79
8901--8997
33
2.9
33
93
0
158
9
28
40
21
1.84
15426--15522
33
2.9
33
93
0
158
11
28
39
20
1.87
19973--20002
13
2.3
13
100
0
60
6
20
0
73
1.05

Tables:   1

The End!