Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006791.1 Corchorus capsularis cultivar CVL-1 contig06812, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23576

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
631--700
33
2.1
33
84
5
88
17
30
35
17
1.92
1461--1485
11
2.3
11
100
0
50
48
8
8
36
1.62
12689--12727
16
2.5
15
83
4
51
56
0
35
7
1.28
14013--14071
31
1.9
31
92
0
100
49
5
11
33
1.62
19693--19742
2
25.5
2
91
4
84
48
0
0
52
1.00
20842--20868
6
4.5
6
100
0
54
70
0
14
14
1.17
21378--21548
96
1.8
92
83
7
227
31
12
1
54
1.45

Tables:   1

The End!