Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006795.1 Corchorus capsularis cultivar CVL-1 contig06816, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15070

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
660--714
26
2.2
26
83
3
67
56
18
10
14
1.67
7452--7526
16
4.8
16
78
3
89
12
13
33
41
1.81
7455--7526
31
2.3
33
85
7
96
12
12
34
40
1.81
7516--7563
17
2.8
17
83
0
60
8
20
41
29
1.81
8400--8448
6
8.5
6
79
20
52
0
18
48
32
1.48
8408--8438
10
3.0
10
95
4
53
0
19
58
22
1.40
8645--9877
437
2.8
435
82
4
1384
26
13
17
42
1.86
13078--13111
12
2.7
13
90
4
52
58
8
11
20
1.59

Tables:   1

The End!