Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006799.1 Corchorus capsularis cultivar CVL-1 contig06820, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25243

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2226--2252
2
13.5
2
100
0
54
48
0
0
51
1.00
5548--5597
26
2.0
25
84
4
64
40
2
40
18
1.62
16945--17003
30
2.0
30
83
6
75
25
15
23
35
1.94
18353--18386
16
2.2
16
89
5
52
47
0
2
50
1.16
19375--19410
19
1.9
18
88
5
54
41
2
22
33
1.68
20689--20725
15
2.4
16
90
4
58
27
5
8
59
1.48
20690--20725
16
2.3
15
90
4
54
27
2
8
61
1.39
24349--24391
21
2.0
21
100
0
86
23
39
9
27
1.85
24739--24794
30
1.9
28
86
13
78
44
12
1
41
1.53

Tables:   1

The End!