Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006801.1 Corchorus capsularis cultivar CVL-1 contig06822, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3048

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--333
153
2.2
154
90
3
521
23
18
18
39
1.92
139--566
233
1.8
232
88
1
660
25
17
17
39
1.91
1--718
385
1.9
383
88
4
1097
24
18
17
39
1.92
371--1754
306
4.5
305
90
2
2024
24
18
17
39
1.91
371--1754
154
9.0
153
90
1
2008
24
18
17
39
1.91
1507--2013
259
2.0
259
94
0
888
22
19
18
39
1.92
1766--3048
154
8.3
153
88
3
1785
22
18
18
41
1.91

Tables:   1

The End!