Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006805.1 Corchorus capsularis cultivar CVL-1 contig06826, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15955

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
313--486
95
1.8
97
94
2
316
48
6
6
38
1.56
525--581
2
29.5
2
87
7
82
50
0
3
45
1.18
1126--1172
23
2.0
23
87
4
67
57
10
2
29
1.44
8759--8820
30
2.1
30
96
0
115
46
12
20
19
1.83
9238--9444
109
1.9
109
86
3
299
29
15
18
35
1.92
9832--9868
18
2.1
19
90
10
60
56
5
13
24
1.58
15420--15931
72
7.1
71
61
15
192
32
14
25
28
1.94
15274--15954
144
4.7
144
93
1
1105
31
14
25
28
1.94

Tables:   1

The End!