Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006809.1 Corchorus capsularis cultivar CVL-1 contig06830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5037

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--532
157
2.7
156
75
8
392
27
21
22
29
1.99
422--633
111
1.9
111
80
7
243
28
23
22
25
1.99
13--1465
427
3.4
426
88
1
2140
27
21
21
29
1.99
971--1386
158
2.6
156
76
8
376
28
21
21
28
1.99
1235--1703
237
2.0
238
93
1
798
27
21
22
28
1.99
808--2130
664
2.0
665
95
0
2396
28
21
21
28
1.99
1472--5037
427
8.3
427
92
1
5792
27
21
21
29
1.98
1472--5037
860
4.2
856
94
1
6097
27
21
21
29
1.98
4094--4300
111
1.9
111
80
0
243
30
22
21
26
1.99

Tables:   1

The End!