Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006810.1 Corchorus capsularis cultivar CVL-1 contig06831, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25434

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5346--5407
22
2.6
24
77
10
65
17
8
9
64
1.47
6293--6341
21
2.3
21
85
0
62
10
34
26
28
1.89
14815--14863
21
2.3
21
85
0
62
10
34
26
28
1.89
15998--16065
32
2.1
32
83
5
84
25
14
17
42
1.87
19396--19457
31
2.0
31
87
0
88
25
20
20
32
1.98
19599--19663
33
2.0
33
93
0
112
29
16
26
27
1.97
21394--21465
21
3.4
21
72
25
62
20
15
8
55
1.66
21384--21763
22
17.1
21
73
15
218
18
18
6
56
1.63
21406--21746
43
7.7
43
74
12
219
18
18
7
55
1.64
21471--21524
15
3.7
15
69
18
51
18
20
5
55
1.62
21549--21766
65
3.3
65
74
12
151
18
19
5
55
1.62
21984--22219
55
4.3
55
89
2
339
25
17
7
49
1.73
22868--23212
51
6.8
51
75
5
240
38
15
4
42
1.66
22867--23219
101
3.5
101
88
2
510
38
15
4
42
1.66

Tables:   1

The End!