Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006814.1 Corchorus capsularis cultivar CVL-1 contig06835, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31751

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
454--527
32
2.3
32
81
6
78
41
33
6
17
1.76
870--912
7
6.3
7
94
2
61
0
6
62
30
1.21
5236--5273
18
2.0
20
85
10
53
60
7
13
18
1.56
5900--5926
6
4.5
6
100
0
54
14
14
0
70
1.17
6188--6224
12
3.0
13
88
11
60
45
0
0
54
1.00
10972--11000
14
2.1
14
100
0
58
0
0
93
6
0.36
10975--10999
13
1.9
13
100
0
50
0
0
96
4
0.24
15095--15156
27
2.3
26
74
17
63
46
29
8
16
1.75
29671--29695
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!