Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006818.1 Corchorus capsularis cultivar CVL-1 contig06839, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37361

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
234--273
2
20.0
2
94
0
71
47
0
2
50
1.14
4826--5179
67
5.3
66
89
3
406
26
15
20
37
1.92
4826--5179
134
2.6
134
85
2
451
26
15
20
37
1.92
12033--12076
2
21.5
2
95
4
79
50
0
2
47
1.13
14886--14943
21
2.7
22
76
12
66
39
1
10
48
1.48
15705--15729
2
12.5
2
100
0
50
52
0
0
48
1.00
18778--18830
25
2.1
25
96
0
97
28
5
16
49
1.69
21406--21448
6
7.3
6
94
2
70
51
11
2
34
1.51
35184--35241
15
3.9
15
93
0
89
15
24
18
41
1.89

Tables:   1

The End!