Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006821.1 Corchorus capsularis cultivar CVL-1 contig06842, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26133

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4101--4134
2
17.0
2
100
0
68
50
0
0
50
1.00
5830--6274
167
2.7
165
85
5
617
39
16
15
29
1.89
6346--6410
3
21.3
3
96
3
121
66
0
0
33
0.92
6844--6933
45
2.0
45
95
4
164
25
22
20
32
1.98
7863--7951
45
2.0
45
93
0
151
24
20
20
34
1.96
8227--8274
24
2.0
25
83
4
62
16
6
6
70
1.28
10262--10298
18
2.1
18
94
0
65
24
8
16
51
1.71
20534--20598
30
2.2
30
83
5
78
13
26
36
23
1.92
23231--23272
2
21.0
2
80
9
50
45
2
4
47
1.36

Tables:   1

The End!