Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006824.1 Corchorus capsularis cultivar CVL-1 contig06845, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34627

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9115--9163
21
2.3
21
89
0
71
12
30
28
28
1.93
10606--10966
193
1.9
192
87
0
533
26
13
22
37
1.91
13350--13392
7
6.1
7
83
8
52
48
2
0
48
1.14
13356--13479
20
6.2
20
65
21
71
46
4
0
48
1.23
13408--13463
26
2.2
26
90
6
89
42
5
0
51
1.24
22903--22950
15
3.1
15
81
6
51
79
0
12
8
0.94
25856--26096
120
2.0
120
97
1
457
27
10
11
50
1.70
26012--26432
210
2.0
212
94
1
740
33
7
16
42
1.77
27659--27691
6
5.8
6
86
13
52
30
51
0
18
1.46
29584--29615
2
16.0
2
100
0
64
50
0
0
50
1.00

Tables:   1

The End!