Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006825.1 Corchorus capsularis cultivar CVL-1 contig06846, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25730

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
455--501
10
4.7
10
78
7
51
80
0
19
0
0.70
471--506
8
4.5
8
86
13
56
88
0
11
0
0.50
458--501
19
2.3
19
92
0
70
84
0
15
0
0.63
469--506
11
3.5
11
89
7
51
89
0
10
0
0.49
6132--6171
3
13.3
3
89
10
64
62
2
0
35
1.09
10612--10642
14
2.2
14
94
0
53
77
0
0
22
0.77
17176--17335
31
5.2
31
84
0
158
31
22
25
20
1.98
22508--22544
7
5.3
7
100
0
74
43
0
29
27
1.55
23660--23727
26
2.6
26
90
0
109
54
10
1
33
1.43
24059--24103
21
2.1
21
83
0
54
42
8
35
13
1.75

Tables:   1

The End!