Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006827.1 Corchorus capsularis cultivar CVL-1 contig06848, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20565

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1564--1618
28
2.0
28
96
3
103
52
10
3
32
1.54
7525--7556
16
2.0
16
93
0
55
28
6
12
53
1.62
10429--10476
20
2.3
20
78
3
51
18
8
8
64
1.46
12090--12156
22
3.0
22
65
8
64
26
20
8
43
1.82
12091--12198
39
2.6
43
87
10
145
27
19
8
44
1.79
12336--12380
18
2.4
19
77
3
56
13
11
4
71
1.29
12786--12848
24
2.6
24
77
5
65
58
20
7
12
1.59
16656--16705
17
2.9
17
93
0
91
28
16
36
20
1.93
18967--19002
19
1.9
18
88
5
54
41
2
22
33
1.68

Tables:   1

The End!