Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006829.1 Corchorus capsularis cultivar CVL-1 contig06850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27764

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1293--1367
16
4.8
16
81
3
98
6
14
38
40
1.73
1293--1367
31
2.4
32
88
2
107
6
14
38
40
1.73
7014--7060
21
2.2
21
96
0
85
51
14
19
14
1.77
8497--8630
65
2.1
65
100
0
268
33
14
19
32
1.92
20238--20307
35
2.0
35
88
0
104
25
25
14
34
1.94
23624--23660
18
2.1
17
90
5
56
64
8
5
21
1.40
24229--24264
18
2.0
18
100
0
72
22
0
27
50
1.50

Tables:   1

The End!