Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006835.1 Corchorus capsularis cultivar CVL-1 contig06856, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20989

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1053--1092
20
2.0
20
85
9
55
62
7
17
12
1.52
9884--9936
5
11.6
5
93
4
62
81
18
0
0
0.70
9890--9937
4
11.0
4
97
2
60
77
22
0
0
0.78
14494--14573
32
2.5
32
78
9
76
32
30
11
26
1.91
15380--15408
12
2.3
13
94
5
51
37
13
20
27
1.91
15453--15485
2
16.5
2
93
0
57
54
0
0
45
0.99
17963--18026
30
2.1
30
88
0
92
39
17
7
35
1.78
20698--20760
29
2.1
30
85
5
83
25
17
14
42
1.87
20834--20884
8
5.7
9
80
15
52
27
0
1
70
0.98
20834--20888
17
3.2
17
86
2
74
27
0
1
70
0.97

Tables:   1

The End!