Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006840.1 Corchorus capsularis cultivar CVL-1 contig06861, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13072

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
592--738
71
2.1
71
100
0
294
21
16
19
42
1.89
2979--3022
22
2.0
22
90
0
70
13
11
15
59
1.62
5562--5733
87
2.0
86
94
3
301
28
11
19
41
1.85
10543--11069
177
3.0
177
99
0
1045
25
18
22
33
1.96
12330--12376
19
2.5
19
79
6
51
38
2
2
57
1.23
12944--12988
13
3.8
12
82
8
56
71
0
0
28
0.87

Tables:   1

The End!