Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006841.1 Corchorus capsularis cultivar CVL-1 contig06862, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15656

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1248--1275
6
4.7
6
100
0
56
17
32
14
35
1.90
5559--5594
19
1.9
18
88
5
54
33
22
2
41
1.68
7169--7215
21
2.4
19
77
16
51
61
12
2
23
1.42
7864--7921
25
2.3
25
96
0
107
10
31
39
18
1.85
9118--9266
16
9.4
16
84
6
180
8
22
36
32
1.85
9713--9760
21
2.3
21
88
0
78
56
6
8
29
1.53
9865--9978
32
3.6
32
83
7
126
8
20
36
34
1.83
9865--10002
16
8.6
16
73
9
111
8
21
36
33
1.84
12626--12680
28
1.9
27
85
10
74
52
7
20
20
1.69

Tables:   1

The End!