Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01006846.1 Corchorus capsularis cultivar CVL-1 contig06867, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10762

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
471--498
2
14.0
2
100
0
56
50
0
0
50
1.00
3477--3527
21
2.4
22
93
3
86
17
47
21
13
1.82
6286--6323
17
2.2
17
90
0
58
2
39
2
55
1.28
6575--6862
144
2.0
144
96
0
531
35
24
12
28
1.92
7714--7765
20
2.6
20
87
6
70
28
5
32
32
1.81
7731--7777
20
2.3
20
96
3
85
25
4
38
31
1.75
9510--9577
2
34.0
2
100
0
136
50
50
0
0
1.00
9845--9878
16
2.1
16
94
0
59
52
5
32
8
1.56

Tables:   1

The End!